Kimberly R. Andrews

Publications

• KM Cammen, KR Andrews, EL Carroll, AD Foote, E Humble, JI Khudyakov, M Louis, MR McGowen, MT Olsen, AM VanCise. 2016. Genomic methods take the plunge: recent advances in high-throughput sequencing of marine mammals. Journal of Heredity  doi:10.1093/jhered/esw044 (Invited Review)
• BW Bowen, MR Gaither, JD DiBattista, M Iacchei, KR Andrews, WS Grant, RJ Toonen, JC Briggs. 2016. Comparative Phylogeography of the Ocean Planet. Proceedings of the National Academy of Sciences 113(29):7962-7969.
• Andrews KR, A Williams, I Fernandez-Silva, S Newman, J Copus, J Randall, BW Bowen. 2016. Phylogeny of deepwater snappers (Genus Etelis) reveals a cryptic species pair in the Indo-Pacific and Pleistocene invasion of the Atlantic Molecular Phylogenetics & Evolution 100:361-371
• Andrews KR, JM Good, MR Miller, G Luikart, PA Hohenlohe. 2016. Harnessing the power of RADseq for ecological and evolutionary genomics. Nature Reviews Genetics 17(81-92)
• Selkoe KA, OE Gaggiotti, EA Treml, JLK Wren, MK Donovan, Hawai‘i Reef Connectivity Consortium, RJ Toonen. 2016. The DNA of coral reef biodiversity: predicting and protecting genetic diversity of reef assemblages. Proceedings of the Royal Society Series B (283):20160354
• Goetze E, KR Andrews, KTCA Peijnenburg, E Portner, E Norton. 2015. Temporal stability of genetic structure in a mesopelagic copepod. PLoS ONE 10(8):e0136087.doi:10.1371/ journal.pone.0136087
• Andrews KR, E Norton, I Fernandez-Silva, E Portner, E Goetze. 2014. Multilocus evidence for globally-distributed cryptic species and distinct populations across ocean gyres in a mesopelagic copepod. Molecular Ecology 23(22):5462-79.
• Andrews KR, PA Hohenlohe, MR Miller, B Hand, JE Seeb, G Luikart. 2014. Trade-offs and utility of alternative RADseq methods: Reply to Puritz et al. 2014. Molecular Ecology 23:5943-5946.
• Andrews KR, G Luikart. 2014. Recent novel approaches for population genomics data analysis. Molecular Ecology 23:1661-1667.
• Andrews KR, V Moriwake, C Wilcox, EG Grau, C Kelley, RL Pyle, BW Bowen. 2014. Phylogeographic analyses of submesophotic snappers Etelis coruscans and Etelis "marshi" (Family Lutjanidae) reveal concordant genetic structure across the Hawaiian Archipelago. PLoS ONE 9(4)e91665
• Selkoe AS, OE Gaggiotti, KR Andrews, MA Bernal, C Bird, H Bolick, I Baums, R Coleman, GT Concepcion, MT Craig, JD DiBattista, J Eble, I Fernandez-Silva, MR Gaither, M Iacchei, NR Polato, MAJ Rivera LA Rocha, D Skillings, M Timmers, Z Szabo, BW Bowen, RJ Toonen. 2014. Emergent patterns of population genetic structure for a coral reef community. Molecular Ecology 23:3064-3079.
• Andrews KR, WF Perrin, M Oremusk, L Karczmarski, BW Bowen, JB Puritz, RJ Toonen. 2013. The evolving male: spinner dolphin (Stenella longirostris) ecotypes are divergent at Y chromosome but not mtDNA or autosomal markers. Molecular Ecology 22(9):2408-23.
• Andrews K 2013. Population Genetics in the Conservation of Primates and Cetaceans. In: L. Karczmarski & J. Yamagiwa (eds.) Primates and Cetaceans: Field Studies and Conservation of Complex Mammalian Societies, pp 289-308, Springer Japan. 
• Toonen RJ, JB Puritz, ZH Forsman, JL Whitney, I Fernandez-Silva, KR Andrews, CE Bird. 2013. ezRAD: A simplified method for genomic genotyping in non-model organisms. PeerJ. 1:e203; DOI 10.7717/peerj.203
• Fernandez-Silva I, J Whitney, B Wainwright, KR Andrews, H Ylitalo-Ward, BW Bowen, RJ Toonen, E Goetze, SA Karl. 2013. Microsatellites for next-generation ecologists: a post-sequencing bioinformatics pipeline. PLoS ONE 8(2): e55990.doi:10.1371/journal.pone.0055990
• Toonen RJ, KR Andrews, IB Baums, CE Bird, GT Concepcion, TS Daly-Engel, JA Eble, A Faucci, MR Gaither, M Iacchei, JB Puritz, JK Schultz, DJ Skillings, M Timmers, BW Bowen. 2011. Defining boundaries for ecosystem-based management: A multispecies case study of marine connectivity across the Hawaiian Archipelago. Journal of Marine Biology 2011: Article ID 460173
• MAJ Rivera*, KR Andrews*, D Kobayashi, J Wren, C Kelley, GK Roderick, RJ Toonen. 2011. Genetic analyses and simulations of larval dispersal reveal distinct populations and directional connectivity across the range of the Hawaiian Grouper (Epinephelus quernus). Journal of Marine Biology 2011: Article ID 765353. *Equal contribution
• Timmers MA, RJ Toonen, KR Andrews, C Bird, MJ deMaintenon, RE Brainard. 2011. Widespread dispersal of the crown-of-thorns sea star, Acanthaster planci, across the Hawaiian Archipelago and Johnston Atoll. Journal of Marine Biology 2011: Article ID 934269.
• Andrews KR, L Karczmarski, WWL Au, SH Rickards, CAVanderlip, BW Bowen, E Gordon Grau, RJ Toonen.  2010.  Rolling stones and stable homes: Social structure, habitat diversity, and population genetics of the Hawaiian spinner dolphin (Stenella longirostris). Molecular Ecology 19:732-748.
• Johnston DW, J Robbins, ME Chapla, D K Mattila, KR Andrews. 2008. Diversity, habitat associations and stock structure of odontocete cetaceans in the waters of American Samoa, 2003-06. Journal of Cetacean Research and Management 10:59-66.
• Andrews KR, L Karczmarski, WWL Au, SH Rickards, CA Vanderlip, RJ Toonen. 2006. Patterns of genetic diversity of the Hawaiian spinner dolphin (Stenella longirostris). Atoll Research Bulletin No. 543:65-73.
• Au WWL, AA Pack, MO Lammers, LM Herman, MH Deakos, K Andrews. 2006. Acoustic properties of humpback whale songs. Journal of the Acoustical Society of America 120:1103-1110.
• Nachtigall PE, WWL Au, JL Pawloski, K Andrews, and CW Oliver. 2000. Measurements of the low frequency components of active and passive sounds produced by dolphins. Aquatic Mammals 26:167-174.